claudecodex

tkoi-agent

tKOI enrichment and its exact analysis graph

1 on GitHubby Baranzini Labv2.0.0MITupdated 1 month agoProductivity
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Plugin tkoi-agent from marketplace tkoi in BaranziniLab/tKOIAgent. Commands read from the repo's manifest — 1 month ago.

This plugin runs code on your machine — it starts local MCP servers. The exact commands are listed below; read them before installing.

What it installs

Skills (2)

  • tkoi-analysis

    Set up R and tKOI, prepare human differential-expression results, run knowledge-graph enrichment, and save the exact analysis graph for contextualization. Use for tKOI analyses and their input preparation.

  • tkoi-knowledge-graph

    Contextualize saved tKOI enrichment by searching nodes, traversing connection layers and finding paths in the exact igraph used for that analysis. Use for tKOI result interpretation and local graph evidence.

MCP servers (1)

  • tkoi-graph

    runs: uv run --script ${CLAUDE_PLUGIN_ROOT}/skills/tkoi-knowledge-graph/scripts/server.py

View source on GitHub baranzinilab.github.io

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