claude

clif-icu

Analyzes ICU clinical data using CLIF format and clifpy. Loads tables, computes SOFA/CCI/Elixhauser scores, creates wide datasets. Ships PHI guardrail hooks and consortium agents (buddy-tester, phi-auditor, code-reviewer).

3 on GitHubApache-2.0updated 16 days ago
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Plugin clif-icu from marketplace clif-skills in Common-Longitudinal-ICU-data-Format/skills. Commands read from the repo's manifest — 14 days ago.

This plugin runs code on your machine — its hooks fire automatically on events like tool use. The exact commands are listed below; read them before installing.

What it installs

Skills (1)

  • clif-icu

    Write, debug, and review CLIF analytical code in R or Python. Confirm the user's CLIF and mCIDE version, retrieve matching GitHub vocabularies, catch case/snake_case and schema bugs, and check macOS/Linux/Windows portability. Use in any coding harness with synthetic data and privacy-safe outputs.

Subagents (3)

  • clif-buddy-tester

    Use when buddy testing, validating, or QA-ing a CLIF study kit before it is distributed to the consortium — verifying it runs at your site, produces every promised poolable artifact, and is PHI-safe. Also use to audit a buddy test report, or to investigate why a CLIF pipeline's output looks wrong or

  • clif-code-reviewer

    Review CLIF code in R, Python, SQL, or notebooks for case/snake_case bugs, schema and vocabulary mismatches, and macOS/Linux/Windows portability. Confirm the user's CLIF version and current mCIDE before checking filters, joins, recodes, and scores.

  • clif-phi-auditor

    Use before sharing, pushing, or distributing ANY CLIF artifact — a repo, results tables, figures, logs, or a study-kit output bundle — to scan it for PHI leakage and small-cell risk. Also use when asked "is this safe to share?". Reports evidence-backed findings with file:line cites; the human makes

Hooks (2)

  • PreToolUse

    "${CLAUDE_PLUGIN_ROOT}/hooks/phi_guard.py"

  • PostToolUse

    "${CLAUDE_PLUGIN_ROOT}/hooks/phi_scan.py"

View source on GitHub

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