pnas-nexus-skills

Plugin pnas-nexus-skills from marketplace awesome-journal-skills in brycewang-stanford/Awesome-Journal-Skills. Commands read from the repo's manifest — 1 month ago.

Skills (12)

• pnasnexus-abstract

  Use to write the PNAS Nexus abstract — a single self-contained paragraph of up to 250 words, with no headings, quantified and accessible to a broad scientific audience. Distinguishes the abstract (what/how/found, for scientists) from the 50–120-word Significance Statement (why-it-matters, for everyo

• pnasnexus-citation

  Use to get PNAS Nexus references right — note that PNAS Nexus accepts references in any readable style at submission (unlike flagship PNAS's strict numbered-by-appearance), so the job is internal consistency, completeness, resolvable in-text citations, and the [dataset] tag for data/software. Prepar

• pnasnexus-data

  Use to build PNAS Nexus's Data and Code Availability — mandatory public-repository deposition of all materials, data, code, and protocols upon publication, retention of raw unprocessed images, accession numbers/DOIs, the [dataset] citation tag, and a compliant availability statement. "Available on r

• pnasnexus-figures

  Use to finalize PNAS Nexus display items — count figures and tables against the graphical-element budget, size to journal column widths, set legible fonts, show-the-data with n and defined error bars, scale bars, colorblind-safe palettes, legend structure, and image integrity (raw, unprocessed image

• pnasnexus-fit

  Use before any writing — as the first gate — to stress-test whether a result fits PNAS Nexus — high-quality, broadly significant, multidisciplinary research across biological/health/medical, physical sciences & engineering, and social & political sciences — and to make the realistic call between PNA

• pnasnexus-openaccess

  Use to settle PNAS Nexus's open-access decisions — confirm the gold-OA model and the article processing charge (APC), check eligibility for waivers/discounts (low-/middle-income countries, Read & Publish, membership) and funder compliance, and choose the license (CC BY vs CC BY-NC). This is PNAS Nex

• pnasnexus-rebuttal

  Use after PNAS Nexus reviews arrive to triage the decision, prioritize experiments, and draft a point-by-point response that is respectful, evidence-led, and honest about limits. Covers the case where reviews were carried over from a PNAS transfer. Do not run before the main text is actually revised

• pnasnexus-significance

  Use to write the PNAS Nexus Significance Statement — between 50 and 120 words, in plain language for a broad scientific audience, explaining why the work matters. Required for Research Reports and Stage 2 Registered Reports. Distinct from the abstract. One of the highest-value PNAS Nexus front-matte

• pnasnexus-statistics

  Use to enforce PNAS Nexus's statistics and reproducibility reporting — n and replication, test choice and assumptions, effect sizes with uncertainty, multiple-comparison control, randomization/blinding, sample-size justification, and reproducible code. Also covers whether a Registered Report (Stage

• pnasnexus-submission

  Use as the final preflight before submitting to PNAS Nexus — a complete checklist across fit, open access/APC/license, article type & length, Significance Statement, abstract, classification, figures, statistics, data/code, references, and required files. Covers the PNAS-transfer case and bundles a

• pnasnexus-workflow

  Use when deciding which pnasnexus-* sub-skill to invoke next, or when sequencing a manuscript from scope/significance test through reviewer rebuttal for PNAS Nexus (the fully open-access sibling journal of PNAS, published by Oxford University Press for the U.S. National Academy of Sciences). Routes

• pnasnexus-writing

  Use to choose the PNAS Nexus article type, structure the main text, and hold the page-based length budget — Research Report / Brief Report / Perspective / Review / Registered Report — keep Materials and Methods in the main text, and select the required research-area classification at submission.

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