biomed-skill
Biomedical framing, writing, polishing, scientific review, citation audits, figures, paper reading, protocols and submission preparation.
Plugin biomed-skill from marketplace biomed-skill in mianaz/biomed-skills. Commands read from the repo's manifest — 4 days ago.
What it installs
Skills (16)
citation-auditAudit specific biomedical manuscript claims against their cited sources, checking identity, original support, scope, numbers and source status. Use for reference verification or a claim-to-source citation audit. Deliver a source-located audit table and targeted repairs; formatting-only edits belong
figure-planPlan biomedical main and supplemental figures from a manuscript story and journal requirements, then assemble separate editable PowerPoint decks from individual panels. Use for figure storyboards, evidence inventories with missing-data placeholders, manuscript figure layout, and whole-figure export
graphpad-prismCreate or edit GraphPad Prism figures and native projects, populate existing Prism templates, and export editable Column, Grouped or XY data tables. Use when the requested deliverable is a Prism project or Prism figure.
paper-distillRead a biomedical paper and its supplements or code to explain its scientific contribution, experimental logic, methods and reusable ideas. Use for biomedical paper distillation, experimental logic and journal-club notes.
paper-evidence-mapExtract a single research paper's argument into an editable evidence graph linking its central claim, subclaims, experiments, controls, and observed results with exact figure and source references. Use for paper logic maps, claim-experiment-result maps, argument reconstruction, evidence diagrams, or
paper-framingDevelop a biomedical study's central scientific contribution, biological significance, conceptual model and overall figure sequence. Use for paper framing, choosing a story, 学术定位、文章主线、科学意义 or deciding which findings to foreground. Deliver a framing brief.
paper-polishingPolish, translate or tighten existing biomedical prose while preserving its scientific meaning and conceptual ambition. Use for language editing, concise wording, 论文润色、学术翻译 or improving an existing passage. Deliver revised text and consequential edit notes.
paper-reviewReview a biomedical manuscript's scientific argument, design and claim support, with prioritized, source-located repairs. Use for manuscript logic review, scientific critique or a scientific pre-submission review. Language editing belongs to paper-polishing; journal rules and file preparation belong
paper-to-protocolTurn a paper's Methods and supplements into a sourced step-by-step experimental or computational protocol, with a human-readable printable copy and a Labmate-compatible import file. Use for paper-to-protocol and paper-to-Labmate workflows.
paper-writingDraft or substantially restructure biomedical manuscript text from figures, results, notes or an existing draft. Use for writing titles, abstracts, manuscript sections, figure legends, significance paragraphs or cover letters, including 中文笔记转英文初稿. Deliver the requested prose.
protocol-to-methodsConvert a laboratory or computational protocol and experiment records into a publication-ready Methods draft, preserving actual parameters, deviations, citations and reproducibility details. Supports Labmate notebook exports and journal-specific Methods structures.
scientific-plotting-tidyplotsUse when the user requests the tidyplots-specific biomedical plotting entry by name. This compatibility entry delegates figure work to scientific-plotting with its tidyplots route; general chart selection and figure repair use scientific-plotting.
scientific-plottingTurn biomedical research data into figures in R, Python or GraphPad Prism, including editable Prism PZFX tables. Choose charts and design-supported statistics, export editable sources, and inspect the rendered result. Use for biomedical comparisons, trajectories, dose responses, omics displays, figu
scientific-reproducibilityPreserve data, analysis choices, parameters and reusable outputs when performing or documenting scientific analyses. Use for source-data exports, saved analysis objects, analysis records and reproducible handoffs. Figure design and rendering belong to scientific-plotting; manuscript Methods drafting
scientific-visual-explainerBuild biomedical mechanism schematics, graphical abstracts, experimental workflows and visual explanations of papers or concepts. Use for pathway diagrams, static manuscript schematics, interactive HTML lessons or requested scientific animations. Data charts belong to scientific-plotting; manuscript
submission-checkDistill current Cell, Nature or Science journal requirements into an actionable checklist and prepare a manuscript submission package. Use for initial submission, revision or final-file preparation, including figures, source data, reporting forms and declarations.
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