A Codex adapter for the agent-portable Galaxy Analysis Harness.
Plugin galaxy-analysis-plugin in qchiujunhao/galaxy-agent-harness. Commands read from the repo's manifest — 1 month ago.
galaxy-analysisUse when a user asks to analyze data in Galaxy, reproduce an analysis in Galaxy, explain Galaxy histories/jobs/outputs/failures, validate Galaxy results, package reproduced Galaxy workflows, or invokes /galaxy-* commands.
/galaxy-analysis-plugin:galaxy-analyzeAnalyze user-provided datasets in Galaxy with an inferred or user-provided goal.
/galaxy-analysis-plugin:galaxy-explainExplain a Galaxy history, job, dataset, output, warning, or failure.
/galaxy-analysis-plugin:galaxy-listList Galaxy Analysis Plugin commands, workflow support, validation profiles, templates, and local capabilities.
/galaxy-analysis-plugin:galaxy-reproduceReproduce an external analysis source in Galaxy and report the resulting history, outputs, and validation status.
/galaxy-analysis-plugin:galaxy-submit-workflowPackage a reproduced Galaxy workflow or history for review, local submission, or an explicitly requested PR.
/galaxy-analysis-plugin:galaxy-upload-workflowPublish or stage a reproduced Galaxy history or workflow entry for the static workflow website.
/galaxy-analysis-plugin:galaxy-validateValidate a completed Galaxy run, output set, or workflow package without rerunning the analysis.
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hooks
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