sahuno

Skills, commands and review agents for computational research. Domain-neutral: adversarial code and statistics review, run verification (catching jobs that exit 0 having silently dropped work), figure provenance, container builds, runtime/resource studies, scatter-gather design, and journal-club paper analysis. Genomics specialisations on top: Snakemake and nf-core pipeline authoring, IGV screenshots, cohort overviews, chimeric-read validation, and a catalogue of empirically confirmed silent-failure modes across DSS, parallel R, small-n cross-validation, Clair3 and Severus.

13 skills · 10 commands · 3 agents

Safety hooks for genomics work. Blocks writes to immutable raw data, cross-species and cross-build genome mixing, untagged genomic outputs, and destructive shell commands; warns on hardcoded contig lists, invalid YAML, and absolute paths in scripts.

hooks

Site configuration for a SLURM HPC cluster: reference-genome registry, container image registry, Snakemake/Nextflow executor profiles, language plot defaults, and measured MSKCC cluster operational knowledge. Fork this one and swap in your own site.

1 skill