med-paper-assistant

Plugin med-paper-assistant from marketplace medpaper in u9401066/med-paper-assistant. Commands read from the repo's manifest — 5 days ago.

Skills (25)

• academic-debate

  學術辯論與觀點比較框架。 LOAD THIS SKILL WHEN: debate、辯論、pro/con、正反方、devil's advocate、挑戰假設、counter-argument、反駁、compare viewpoints、比較觀點、challenge、質疑 CAPABILITIES: 純指令技能，不需要專屬 MCP tool。利用 LLM 推理能力 + 現有 tools (read_draft, search_local_references) 完成分析。

• academic-writing-harness

  Cross-agent workflow for evidence-grounded manuscripts, proposals, reports, student papers, and preprints with auditable gates.

• auto-paper

  全自動論文撰寫 + 閉環自我改進系統。 LOAD THIS SKILL WHEN: 全自動寫論文、auto write、自動撰寫、幫我寫完整篇、autopilot、從頭到尾、一鍵寫論文 CAPABILITIES: 編排所有研究 Skills + 3 層 Audit Hooks + Meta-Learning 自我改進

• concept-development

  發展研究概念並驗證創新性。觸發：concept、發展概念、研究概念、novelty、創新點、補充概念、幫我補充、擴展概念、加強、驗證失敗、novelty不夠、怎麼改。

• concept-validation

  概念驗證：確保 concept.md 達到可寫作標準。 LOAD THIS SKILL WHEN: 驗證、validate、可以開始寫了嗎、novelty 夠嗎、check concept CAPABILITIES: validate_concept, validate_concept_quick, validate_for_section

• draft-writing

  論文草稿的撰寫、讀取、引用管理。 LOAD THIS SKILL WHEN: 寫草稿、draft、撰寫、Introduction、Methods、Results、Discussion、引用、citation、字數、patch、編輯草稿 CAPABILITIES: draft_action(action="write"|"section"|"read"|"list"|"insert_citation"|"sync_references"|"count_words"|"available_citations"|"patch")

• idea-validation

  研究假說驗證與可行性評估框架。 LOAD THIS SKILL WHEN: hypothesis、假說、PICO、feasibility、可行性、testable、可驗證、研究計畫評估、check feasibility CAPABILITIES: 純指令技能，不需要專屬 MCP tool。利用 LLM 推理能力 + 現有 tools (list_saved_references, search_local_references) 完成分析。

• literature-review

  系統性文獻搜尋、篩選、下載、整理。觸發：文獻回顧、找論文、搜尋文獻、systematic review、literature search、PubMed、找文章、搜paper、review、reference、citation、引用、參考文獻、背景調查、background。

• manuscript-review

  模擬同行審稿與報告指引合規性檢查框架。 LOAD THIS SKILL WHEN: peer review、同行審查、reviewer、審稿、reporting guidelines、CONSORT、STROBE、PRISMA、CARE、critique、檢查稿件、稿件問題 CAPABILITIES: 純指令技能，搭配 read_draft MCP tool 讀取草稿內容。LLM 用醫學知識做審查，比 regex 更準確。

• parallel-search

  Run multiple complementary literature searches and merge results for broad coverage. Triggers include parallel search, 並行搜尋, 廣泛搜尋.

• pdf-asset-extractor

  MCP tools for PDF ingestion → extract figures, tables, sections → build knowledge graph. Transforms PDF into queryable assets (images, tables, text) with cross-document RAG. Triggers: PDF, ingest, extract, 圖片, 表格, figure, table, manifest, knowledge graph, 知識圖譜, RAG, 文獻分析.

• pipeline-persistence

  Pipeline persistence — save, load, and reuse structured search plans. Triggers: pipeline, 管道, search plan, 搜尋計畫, 重複搜尋, saved search, 排程, schedule, workflow, DAG

• project-management

  研究專案的建立、切換、設定管理。 LOAD THIS SKILL WHEN: 新專案、切換專案、專案設定、paper type、start exploration、convert exploration CAPABILITIES: project_action, workspace_state_action

• pubmed-export-citations

  Export citations with prepare_export. Triggers: 匯出, export, RIS, BibTeX, EndNote, Zotero, Mendeley, 引用格式, reference manager

• pubmed-fulltext-access

  Full text access using get_fulltext, figure extraction, and institutional link tools. Triggers: 全文, fulltext, PDF, open access, 免費下載, PMC, 開放取用

• pubmed-gene-drug-research

  Gene, compound, and variant research using search_gene, search_compound, and search_clinvar. Triggers: 基因, gene, 藥物, drug, compound, PubChem, ClinVar, 變異, variant, 臨床意義

• pubmed-mcp-tools-reference

  Complete reference for all 41 PubMed Search MCP tools. Triggers: 工具列表, all tools, 完整功能, tool reference, 有哪些工具

• pubmed-multi-source-search

  Cross-database search using unified_search across academic sources. Triggers: 跨資料庫, multi-source, Semantic Scholar, OpenAlex, CORE, Europe PMC, 綜合搜尋

• pubmed-paper-exploration

  Deep exploration from a key paper using related, citing, reference, and citation tree tools. Triggers: 這篇論文的相關研究, 誰引用這篇, 類似文章, related articles, citation tree, paper exploration

• pubmed-pico-search

  Agent-guided PICO clinical question search using validate_pico_plan handoff and unified_search. Triggers: PICO, 臨床問題, A比B好嗎, treatment comparison, clinical question, 療效比較

• pubmed-quick-search

  Quick literature search using unified_search. Triggers: 搜尋, 找論文, search papers, find articles, PubMed, 文獻搜尋, 快速搜尋

• pubmed-systematic-search

  Bounded, reproducible review-seed search using generate_search_queries and unified_search. Triggers: 系統性搜尋, 完整搜尋, 文獻回顧, systematic search, comprehensive, MeSH expansion, 同義詞

• reference-management

  Save, inspect, format, and verify scholarly references while preserving PubMed-first metadata trust boundaries.

• submission-preparation

  Prepare journal submission artifacts, cover letters, highlights, reviewer responses, and compliance checklists.

• word-export

  Word 匯出技能 - 將草稿匯出為符合期刊格式的 Word 文件。 LOAD THIS SKILL WHEN: 匯出 Word、export、template、word count、轉成 docx

MCP servers (6)

• mdpaper

  runs: uvx --python 3.12 --from med-paper-assistant[provenance,watermark]==1.1.0 med-paper-assistant

• pubmed-search

  runs: uvx --python 3.12 --from https://github.com/u9401066/pubmed-search-mcp/archive/d8ddc6a0fa9e87a5c9bbc25fa5a496223192eec3.tar.gz pubmed-search-mcp

• asset-aware

  runs: uvx --python 3.12 --from https://github.com/u9401066/asset-aware-mcp/archive/fa0e3489f83ea5922f06cb6b26bf0726872690c1.tar.gz asset-aware-mcp

• cgu

  runs: uvx --python 3.12 --from https://github.com/u9401066/creativity-generation-unit/archive/bb32a8f42123223a1cc54a41f7baed93b0c90d50.tar.gz cgu-server

• drawio

  runs: uvx --python 3.12 --from https://github.com/u9401066/next-ai-draw-io/archive/9bde25bac9ec160b912ddfebcb5ac037ce565e2f.tar.gz#subdirectory=mcp-server drawio-mcp-server

• zotero-keeper

  runs: uvx --python 3.12 --from https://github.com/u9401066/zotero-keeper/archive/68a9a1a914cbf3ca8737b8f467cb505e6e445092.tar.gz#subdirectory=mcp-server zotero-keeper

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