alterlab-databases
claudeConnectors to scientific databases (PubMed, ChEMBL, UniProt, GEO, and more) (38 skills)
38 skills · 1 MCP server
Clinical decision support, medical imaging, and regulatory workflows (7 skills)
Plugin alterlab-clinical-research from marketplace alterlab-academic-skills in AlterLab-IEU/AlterLab-Academic-Skills. Commands read from the repo's manifest — 6 days ago.
alterlab-clinical-decisionGenerates professional clinical decision support (CDS) documents for pharmaceutical and clinical research settings — biomarker-stratified patient cohort analyses with outcomes and evidence-based treatment recommendation reports with decision algorithms, supporting GRADE evidence grading, statistical
alterlab-clinical-reportsWrites comprehensive clinical reports — case reports (CARE guidelines), diagnostic reports (radiology, pathology, lab), clinical trial reports (ICH-E3, SAE, CSR), and patient documentation (SOAP notes, H&P, discharge summaries) — with templates, regulatory compliance (HIPAA, FDA, ICH-GCP), and valid
alterlab-iso13485Prepares ISO 13485 certification documentation for medical device Quality Management Systems (QMS) — gap analysis of existing documentation, Quality Manuals, required procedures and work instructions, and Medical Device Files. Use for ISO 13485 QMS documentation, conducting a documentation gap analy
alterlab-neurokit2Processes and analyzes physiological biosignals with the NeuroKit2 Python toolkit — ECG, EEG, EDA, RSP, PPG, EMG, and EOG signals. Use when processing cardiovascular signals, brain activity, electrodermal responses, respiratory patterns, muscle activity, or eye movements, or when computing heart rat
alterlab-pydicomReads, writes, and manipulates DICOM (Digital Imaging and Communications in Medicine) medical imaging files with the pydicom Python library. Use when reading/writing/modifying DICOM data, extracting pixel data from CT, MRI, X-ray, or ultrasound images, anonymizing DICOM files, working with DICOM met
alterlab-pyhealthDevelops, tests, and validates clinical machine learning models with the PyHealth 2.x healthcare AI toolkit. Use when working with electronic health records (EHR), clinical prediction tasks (mortality, readmission, length of stay, drug recommendation), medical coding systems (ICD, NDC, ATC, CCS), ph
alterlab-treatment-plansGenerates concise (3-4 page), focused medical treatment plans in LaTeX/PDF format across all clinical specialties — general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, and pain management — using SMART goal frameworks, evidence-based
Connectors to scientific databases (PubMed, ChEMBL, UniProt, GEO, and more) (38 skills)
38 skills · 1 MCP server
Genomics, proteomics, and single-cell analysis (Scanpy, BioPython, pysam, ESM) (38 skills)
38 skills
Machine learning and statistics (scikit-learn, PyTorch, transformers, SHAP) (22 skills)
22 skills
Quantum computing, geospatial, materials, astronomy, and digital humanities (18 skills)
18 skills
Stage-gated social-science methods spine — orchestrator + 5 validity gates (design/identifying-assumption, measurement, sampling/power, reflexivity, inference) and 11 analysis modules (causal inference, complex-survey analysis, SEM/psychometrics, multilevel models, QCA, SNA, ABM, text-as-data, qualitative analysis, meta-analysis, missing data) (17 skills)
17 skills
Search, discovery, Zotero, qualitative methods, ethics, and open science (14 skills)
14 skills
Full Domino Data Lab platform support — workspaces, jobs, model deployment, experiment tracking, GenAI tracing, Spark/Ray/Dask, and app deployment for data science teams
26 skills · 4 commands · 3 agents · 1 MCP server
HR policy documentation, legal compliance templates (GDPR/SOC2/HIPAA), employment contracts, and regulatory documentation
2 skills · 2 agents
Carta Investors plugin — skills for querying investors data, performance benchmarks, regulatory reporting, AGM deck generation, brand extraction, and more via the Carta MCP server
29 skills · hooks
14 regulatory affairs & quality management skills for HealthTech/MedTech: ISO 13485 QMS, MDR 2017/745, FDA 510(k)/PMA, GDPR/DSGVO, ISO 27001 ISMS, CAPA management, risk management, clinical evaluation, SOC 2 compliance.
21 skills
Sets up the clinic, onboards students, runs structured intake, tracks deadlines with malpractice-aware caution, and hands off cases at semester end — built within ABA Formal Op. 512.
16 skills · 5 MCP servers
De-identify PHI, run clinical NER, export FHIR, evaluate with leakage gates, and the healthcare workflows around them.
74 skills
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