alterlab-databases
claudeConnectors to scientific databases (PubMed, ChEMBL, UniProt, GEO, and more) (38 skills)
38 skills · 1 MCP server
Document and Markdown conversion (MarkItDown, Open Notebook) (3 skills)
Plugin alterlab-document-tools from marketplace alterlab-academic-skills in AlterLab-IEU/AlterLab-Academic-Skills. Commands read from the repo's manifest — 6 days ago.
alterlab-markitdownConverts files and Office documents to clean, LLM-friendly Markdown with Microsoft MarkItDown (markitdown CLI, Python API, and markitdown-mcp server), supporting PDF, DOCX, PPTX, XLSX/XLS, images (EXIF metadata, descriptions), audio (transcription), HTML, CSV, JSON, XML, ZIP archives, EPUB e-books,
alterlab-open-notebookRuns and scripts Open Notebook, a self-hosted open-source alternative to Google NotebookLM with a full REST API, for AI-powered research and document analysis. Use when organizing research materials into notebooks, ingesting diverse content sources (PDFs, videos, audio, web pages, Office documents),
alterlab-pdf-exploreExplore a single PDF in depth — parse it once, then answer questions across its sections, figures, tables, and appendices — comparing methods across sections, extracting every instance of a pattern within the document, and reading values off its charts and tables. Use when interrogating one paper or
Connectors to scientific databases (PubMed, ChEMBL, UniProt, GEO, and more) (38 skills)
38 skills · 1 MCP server
Genomics, proteomics, and single-cell analysis (Scanpy, BioPython, pysam, ESM) (38 skills)
38 skills
Machine learning and statistics (scikit-learn, PyTorch, transformers, SHAP) (22 skills)
22 skills
Quantum computing, geospatial, materials, astronomy, and digital humanities (18 skills)
18 skills
Stage-gated social-science methods spine — orchestrator + 5 validity gates (design/identifying-assumption, measurement, sampling/power, reflexivity, inference) and 11 analysis modules (causal inference, complex-survey analysis, SEM/psychometrics, multilevel models, QCA, SNA, ABM, text-as-data, qualitative analysis, meta-analysis, missing data) (17 skills)
17 skills
Search, discovery, Zotero, qualitative methods, ethics, and open science (14 skills)
14 skills
Talk like caveman. Cut filler. Keep technical details explicit.
22 skills · 1 command · 3 agents · hooks
Persistent memory for Claude Code: the next session starts where the last one left off.
29 skills · 1 MCP server · hooks
tasteskill 2.5.1: professional company websites at the figma.com and x.ai level, with one section per screen, real photographs, real product UI, effects kept for tech and gaming pages, and a real-browser checker and finish gate.
1 skill
Open-source AI job search that runs locally in your AI coding CLI: scan job portals, evaluate listings into a structured A-H report with a 1-5 score, tailor your CV, track applications
5 skills · hooks
Cross-session memory and token savings for coding agents.
6 skills · 1 agent · 1 MCP server · hooks
Package any website or local web build into a lightweight desktop app with Pake CLI.
1 skill
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