alterlab-databases
claudeConnectors to scientific databases (PubMed, ChEMBL, UniProt, GEO, and more) (38 skills)
38 skills · 1 MCP server
Publication-quality plotting and schematics (Matplotlib, Seaborn, Plotly) (9 skills)
Plugin alterlab-visualization from marketplace alterlab-academic-skills in AlterLab-IEU/AlterLab-Academic-Skills. Commands read from the repo's manifest — 6 days ago.
alterlab-figure-qaVerify publication figures with a render-then-check QA pass — data-fidelity against every underlying row, axis/label floor-and-ceiling legibility, bounding-box collision detection for overlapping text/markers, and 300-dpi print-readiness. Use when proofing or auditing a finished figure for correctne
alterlab-generate-imageCreates and edits images for research communication with no API key — Claude draws illustrations, concept art, icons, backgrounds and slide/poster visuals as code (SVG, TikZ, matplotlib) rendered locally with exact, editable text, and edits existing images with Pillow (crop, annotate, scale bars, re
alterlab-infographicsCreates professional infographics with no API key: Claude lays the graphic out as code (SVG, with charts computed from the numbers), renders it locally to PNG/PDF with every word and figure exact, sources statistics with web search when asked, each tied to a citation, then reviews the render itself
alterlab-matplotlibBuilds plots with the matplotlib Python library (pyplot and the object-oriented Figure/Axes API) for full low-level customization, exporting to PNG/PDF/SVG. Use when fine-grained control over individual plot elements is needed — custom line/scatter/bar/histogram/heatmap/contour/box/violin/3D plots,
alterlab-mermaidWrites Markdown documents and text-based Mermaid diagrams (flowcharts, sequence, class, ER, gantt, state, and more) with full style guides, 24 diagram-type references, and 9 document templates. Use when a diagram or technical document should live as version-controllable Markdown/Mermaid text rather
alterlab-plotlyBuilds INTERACTIVE charts with the Plotly Python library (plotly.express / graph_objects) — hover tooltips, zoom/pan, animations, rangesliders, 3D rotation, and standalone HTML/web-embeddable output. Use when a chart must be interactive or web-embedded, for dashboards (incl. Dash), exploratory data
alterlab-scientific-schematicsCreates publication-quality scientific diagrams with no API key - Claude draws the diagram as code (SVG, TikZ/PGF, schemdraw for circuits), renders it locally to PNG/PDF with exact, editable labels, then reviews the render itself against a document-type quality threshold (journal 8.5/10, poster 7.0,
alterlab-scientific-vizOrchestrates matplotlib, seaborn, and plotly with opinionated publication styles to produce journal-ready figures. Use when preparing journal-submission figures that need multi-panel layouts with bold panel labels, statistical significance annotations, error bars, colorblind-safe palettes (Okabe-Ito
alterlab-seabornBuilds statistical plots with the seaborn Python library and pandas DataFrame integration, on attractive matplotlib-based defaults. Use for quick exploration of distributions, relationships, and categorical comparisons — box plots, violin plots, swarm/strip plots, KDE/histograms, pair plots, joint p
Connectors to scientific databases (PubMed, ChEMBL, UniProt, GEO, and more) (38 skills)
38 skills · 1 MCP server
Genomics, proteomics, and single-cell analysis (Scanpy, BioPython, pysam, ESM) (38 skills)
38 skills
Machine learning and statistics (scikit-learn, PyTorch, transformers, SHAP) (22 skills)
22 skills
Quantum computing, geospatial, materials, astronomy, and digital humanities (18 skills)
18 skills
Stage-gated social-science methods spine — orchestrator + 5 validity gates (design/identifying-assumption, measurement, sampling/power, reflexivity, inference) and 11 analysis modules (causal inference, complex-survey analysis, SEM/psychometrics, multilevel models, QCA, SNA, ABM, text-as-data, qualitative analysis, meta-analysis, missing data) (17 skills)
17 skills
Search, discovery, Zotero, qualitative methods, ethics, and open science (14 skills)
14 skills
Talk like caveman. Cut filler. Keep technical details explicit.
22 skills · 1 command · 3 agents · hooks
Persistent memory for Claude Code: the next session starts where the last one left off.
29 skills · 1 MCP server · hooks
tasteskill 2.5.1: professional company websites at the figma.com and x.ai level, with one section per screen, real photographs, real product UI, effects kept for tech and gaming pages, and a real-browser checker and finish gate.
1 skill
Open-source AI job search that runs locally in your AI coding CLI: scan job portals, evaluate listings into a structured A-H report with a 1-5 score, tailor your CV, track applications
5 skills · hooks
Cross-session memory and token savings for coding agents.
6 skills · 1 agent · 1 MCP server · hooks
Package any website or local web build into a lightweight desktop app with Pake CLI.
1 skill
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