paperclip2biookf

Plugin paperclip2biookf in Broccolito/BioOKF. Commands read from the repo's manifest — 12 days ago.

Skills (6)

• analyze-biookf-network

  Calculate and interpret topology metrics, node centralities, Leiden communities, and source-year evidence growth for a local BioOKF knowledge base. Use when asked to characterize network structure, find hubs or bridges, inspect fragmentation or modularity, compare KBs, export metric JSON, or analyze

• chat-with-biookf

  Chat with a selected local BioOKF knowledge base using grounded retrieval and a local Codex or Claude subscription. Use for questions, summaries, comparisons, and provenance tracing inside a KB.

• create-local-biookf

  Create a verified BioOKF knowledge base from a local folder of PDF, DOCX, Markdown, or text papers with a local Codex or Claude subscription. Use for private paper collections and local folder ingestion.

• doctor-biookf

  Inspect and transactionally revise a local BioOKF knowledge base against cited raw evidence using a local Codex or Claude subscription. Use to recheck edges against papers, repair provenance, correct claims, split conflated concepts, merge true duplicate nodes, and resolve identifiers.

• generate-paperclip-kb

  Discover biomedical evidence with local Paperclip and generate a verified BioOKF KB using a local Codex or Claude subscription. Use for Paperclip searches, dated evidence generation, and refresh candidates.

• merge-biookf-bases

  Semantically merge two or more BioOKF bundles while preserving provenance and canonical identifiers using a local Codex or Claude subscription. Use for consolidation, refresh integration, deduplication, and longitudinal evidence growth.

MCP servers (1)

• biookf

  runs: bokf-mcp