Expert-thinking subagents for molecular & cell biology: genetics, genomics, omics, biochemistry, biophysics, microbiology, immunology, virology, and structural/synthetic/systems biology.
63 agents
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claude
sci-proteomics-mass-spec
LC-MS/MS processing, spectral matching, peptide ID, and glycoengineering.
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Plugin sci-proteomics-mass-spec from marketplace plugin-place in galeep/plugin-place. Commands read from the repo's manifest — today.
What it installs
Skills (3)
glycoengineeringAnalyze and engineer protein glycosylation. Scan sequences for N-glycosylation sequons (N-X-S/T), predict O-glycosylation hotspots, and access curated glycoengineering tools (NetOGlyc, GlycoShield, GlycoWorkbench). For glycoprotein engineering, therapeutic antibody optimization, and vaccine design.
matchmsProcess, clean, compare, and search tandem mass spectra with matchms. Use for MS/MS file I/O, metadata harmonization, peak filtering, spectral similarity, library matching, score matrices, and molecular-similarity networks. Use pyopenms instead for LC-MS feature detection or proteomics pipelines.
pyopenmsComplete mass spectrometry analysis platform. Use for proteomics and metabolomics workflows—feature detection, peptide/protein identification, label-free and isobaric quantification, adduct/accurate-mass annotation, and complex LC-MS/MS pipelines. Supports extensive file formats and algorithms. For
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