compbio
claudeComputational biology — perturbation analysis, single-cell, spatial omics, databases, project continuity
38 skills
Coding agents — Claude Code, Codex, MCP, handoffs, engineering guidelines
Plugin agents from marketplace ai-skills in CHENyiru3/AI-Skills-Collections. Commands read from the repo's manifest — 3 days ago.
claude-codeDelegate an explicitly requested task to Claude Code CLI, monitor it and review the result. Use for another Claude run or CLI automation; not for ordinary coding within the current agent.
codexDelegate an explicitly requested task to the Codex CLI and inspect its result. Use when the user wants another Codex run or CLI automation; not for ordinary coding already handled by the current agent.
ub-modeApply the reduced engineering principles when the user explicitly invokes ub-mode or requests them. Use for that chosen coding workflow; not as a mandatory process for every code edit.
mcp-builderBuild or change an MCP server that exposes a specific service or workflow through tools, resources or prompts. Use for MCP server implementation and protocol troubleshooting; not for ordinary use of an existing connected tool.
codex-backupPreview, backfill, or sync local Codex chat transcripts from macOS, Linux, Windows, or WSL into a private GitHub Markdown archive. Use when asked to back up Codex chat history or reuse a backup on another machine.
handoffWrite a compact temporary conversation handoff for another agent. Use when the user explicitly requests session transfer; not automatic project logging or continuation of the underlying task.
linux-codex-backupLocate and back up local Codex chat history on Linux, including yiru-linux, or diagnose Linux backup paths, GitHub CLI access, and explicitly requested systemd user jobs. Use with codex-backup; use macos-codex-backup for Mac-specific setup.
macos-codex-backupLocate and back up macOS Codex chat history, or diagnose an existing macOS backup job. Use for Mac-specific history locations, GitHub authentication, or LaunchAgent issues.
Computational biology — perturbation analysis, single-cell, spatial omics, databases, project continuity
38 skills
Document processing — OfficeCLI, Excel, Word, PowerPoint, PDF, web design, and collaboration
20 skills
AI/ML — VI methodology, PyTorch, Transformers, PEFT, TRL, distributed training
14 skills
Academic writing, literature review, Marp presentations, LaTeX, Obsidian, and knowledge management
14 skills
Python library development — project setup, testing, packaging, performance, security, API design
13 skills
Platform integrations — GitHub workflows and Google Workspace CLI/Drive transfers
10 skills
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