compbio
claudeComputational biology — perturbation analysis, single-cell, spatial omics, databases, project continuity
38 skills
Platform integrations — GitHub workflows and Google Workspace CLI/Drive transfers
Plugin platforms from marketplace ai-skills in CHENyiru3/AI-Skills-Collections. Commands read from the repo's manifest — 3 days ago.
codebase-inspectionMeasure repository file/line/language composition with a defined scope, using pygount when available. Use for requested codebase statistics; not executing reviewed code or altering system Python to install a metric tool.
github-authSet up or troubleshoot GitHub authentication when the requested operation lacks suitable access. Reuse working connectors/credentials; ordinary GitHub reads and local diffs do not require reauthentication or global Git changes.
github-code-reviewReview a local diff or GitHub PR for concrete correctness and risk findings. Use for an explicit code review; report locally unless posting comments or a formal review was requested.
github-issuesCreate, manage, triage, and close GitHub issues. Search existing issues, add labels, assign people, and link to PRs. Works with gh CLI or falls back to git + GitHub REST API via curl.
github-pr-workflowPrepare or manage a GitHub PR, its requested CI repairs, or an authorized merge. Use for the specified PR lifecycle steps; editing alone does not imply commit/push/merge and a review does not imply posting.
github-repo-managementClone, create, fork or configure a specific GitHub repository, release, workflow or secret when requested. Use for repository administration; read-only inspection does not authorize visibility changes, publication or unrelated global configuration.
gws-drive-uploadUpload a local file as a new Google Drive item with gws drive +upload, optionally choosing its parent and name. Use for an authorized new-file upload; not replacement of an existing item or recursive synchronization.
gws-driveList, retrieve, create, update, or manage Google Drive files, folders, and shared-drive resources through the gws CLI. Use for a requested Drive API operation; use gws-drive-upload for a simple new-file upload.
gws-sharedResolve Google Workspace CLI authentication, request syntax, pagination, output handling, or command discovery for a gws workflow. Use when shared CLI mechanics matter; not as a trigger for unrelated Google product requests.
yiru-google-driveTransfer local files or folder trees to or from Google Drive using an already configured gws CLI, including native-document export and retry accounting. Use for requested transfers; not account provisioning, sharing changes, or deletion synchronization.
Computational biology — perturbation analysis, single-cell, spatial omics, databases, project continuity
38 skills
Document processing — OfficeCLI, Excel, Word, PowerPoint, PDF, web design, and collaboration
20 skills
AI/ML — VI methodology, PyTorch, Transformers, PEFT, TRL, distributed training
14 skills
Academic writing, literature review, Marp presentations, LaTeX, Obsidian, and knowledge management
14 skills
Python library development — project setup, testing, packaging, performance, security, API design
13 skills
Coding agents — Claude Code, Codex, MCP, handoffs, engineering guidelines
8 skills
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